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Molecule
ID:125653
Structure
Similarity
Functional Group
Text
General Information
Structure
Molecular Formula
C₅H₁₄N₄
Molecular Mass
130.19146
Exact Mass
130.12184647
Charge
0
InChI
InChI=1S/C5H14N4/c6-3-1-2-4-9-5(7)8/h1-4,6H2,(H4,7,8,9)
InChIKey
QYPPJABKJHAVHS-UHFFFAOYSA-N
Canonic Smiles
NCCCCNC(=N)N
Isomeric Smiles
NCCCCNC(=N)N
Calculated Properties
JChem
LogD (pH = 7.4)
-5.89
LogD (pH = 5.5)
-6.60
Log P
-1.18
Rotatable Bonds
4
H Donor
4
H Acceptors
4
Lipinski's Rule of Five
true
Acid pKa
12.61
Polar Surface Area
87.92
Polarizability
15.01
Molar Refractivity
48.09
LOG S
0.19
Data Source
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Names and Identifiers
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Registration numbers
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Properties
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Related Proteins
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Molecular Spectra
No Data Available
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Molecule Details
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References
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Bioactivity
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Quote
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General Information
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RDKit
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JChem
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Academic Data
Names and Identifiers
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IUPAC Traditional name
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Synonyms
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IUPAC name
Registration numbers
Properties
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Physical Property
Related Proteins
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PDB Bank
Molecular Spectra
Molecule Details
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Wikipedia
References
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PubChem Literature
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From Data Sources
Bioactivity
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PubChem BioAssay
Data Source
Academic Data
Wikipedia
Agmatine
PubChem
199
ChEBI
CHEBI:17431
Names and Identifiers
IUPAC Traditional name
agmatine
Synonyms
Agmatine
(4-Aminobutyl) guanidine
Agmatine
N-(4-aminobutyl)guanidine
agmatine
(4-aminobutyl)guanidine
IUPAC name
1-(4-aminobutyl)guanidine
N-(4-aminobutyl)guanidine
Properties
Physical Property
Density
1.2 g/ml
Source
Partition Coefficient
-1.423
Source
Boiling Point
281°C
Source
Related Proteins
PDB Bank
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4XQG
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5J4N
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1N13
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6S49
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1YPM
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4XR4
6YE6
1MT1
3IQD
6B2W
1YPL
4XRG
3N2O
4XZK
4XQE
7LOL
4YV8
2QQD
5O69
3AU7
6AGG
1AQ7
5NEX
2QQC
6S3X
3AMU
Molecule Details
Wikipedia
Agmatine
References
PubChem Literature
No Data Available
Click here to submit data
Bioactivity
PubChem BioAssay
Registration numbers
•
PubChem CID
•
CHEBI ID
•
CHEMBL
•
CAS Number
•
Wikipedia Title
•
KEGG ID
•
MeSH Name
•
EC Number
•
Chemspider ID
•
PubChem SID
•
Protein Data Bank
•
UniProt Database
•
MetaboLights Database
•
BRENDA Database
•
BRENDA Ligand Database
•
BKMS React Database
•
ACToR Database
•
SABIO-RK Database
•
Patent number
•
CompTox Database
•
Golm Database
•
BindingDB Database
•
KNApSAcK Database
•
SureChEMBL Database
Registration numbers
PubChem CID
199
CHEBI ID
17431
CHEBI:18576
CHEBI:40556
CHEBI:13747
CHEBI:17431
CHEBI:2514
CHEMBL
58343
CHEMBL58343
CAS Number
306-60-5
Wikipedia Title
Agmatine
KEGG ID
C00179
MeSH Name
Agmatine
EC Number
206-187-7
Chemspider ID
194
PubChem SID
162220003
8144144
Protein Data Bank
4xqg
5j4n
1n13
6s49
1ypm
4xr4
6ye6
1mt1
3iqd
6b2w
1ypl
4xrg
3n2o
4xzk
4xqe
7lol
UniProt Database
Q9I6J9
A4WIW6
Q9K9K5
A9KYH3
Q8GWW7
Q8MJI6
Q8EIF2
C1CK08
C1C6Q3
O30240
A8FWJ3
Q58495
A1AFC5
B5RE39
O82475
MetaboLights Database
MTBLS181
MTBLS543
MTBLS1906
MTBLS926
MTBLS440
MTBLS3146
MTBLS406
MTBLS1267
MTBLS309
MTBLS1572
MTBLS2871
MTBLS3854
MTBLS179
MTBLS353
MTBLS670
BRENDA Database
3.5.3.24
3.5.3.7
1.4.3.10
1.5.3.14
4.1.1.B12
4.1.1.19
2.5.1.104
2.3.1.109
6.3.4.22
3.5.1.40
3.4.21.74
1.5.3.16
2.7.3.10
3.5.3.15
BRENDA Ligand Database
505
21812
BKMS React Database
21812
505
ACToR Database
306-60-5
SABIO-RK Database
14103
594
97
7224
14787
1603
969
595
1762
Patent number
US2005020659
WO2006024453
EP1630164
US2007212311
EP1369134
WO2006066894
US2006270608
US2004171682
US2007203240
EP1749525
WO2008157537
US2005175543
WO2006113140
CompTox Database
DTXSID0040961
Golm Database
e58675f5-5dba-4524-927d-57109b20c13f
c62df555-ecc1-4cd2-b807-73188b7df34e
BindingDB Database
85213
KNApSAcK Database
C00001400
SureChEMBL Database
SCHEMBL19647
4yv8
2qqd
5o69
3au7
6agg
1aq7
5nex
2qqc
6s3x
3amu
Q8A2B1
Q87JS8
P60657
Q8RPX2
Q6CZ80
Q5JFI4
Q8IZD6
O59476
B4THH1
Q8DW17
Q8DQ68
P60659
B0BC08
B4S6J7
A3PA96
Q90XD2
A4VFL7
A2BU00
B4T5J3
A6TDU9
Q7X3P1
Q8FE36
B1XF99
Q0TDR4
Q8VYF5
Q87UB2
Q8KEX0
Q9CEY6
O70577
B3ELD9
A6UY93
A5GB52
O27983
Q4KJX9
A9A5S1
P58890
D9Q2C4
Q57764
Q5KR05
A3DLU8
Q8TK89
Q0HF12
Q9FNP9
C3NEW5
A8MA77
Q7VEG4
B1LDE6
Q9CL60
B4THG3
C6E3V4
Q81MS2
Q7N121
B7S4N1
P0C8R5
A6VVD9
B7MZN5
P0C8R4
A1RKK8
P49726
Q822F3
Q9RQJ2
B8E8S8
A0RZ60
B0U1H6
Q1R791
Q39X78
A4WE75
B7LFJ6
P60066
Q0W1C7
Q5R5H7
Q10088
Q9C0Y9
P22220
A1AS90
Q822F2
O59240
Q7U3S0
Q39827
P21885
A3D3G2
P60064
Q9BSE5
O86509
Q9XGI9
A8AAB6
P74576
Q57K36
Q9WZC2
B4RP98
P60655
Q7B9Y6
Q6MSR8
A7FEY8
D7DRZ8
Q57K30
Q81JT1
B8EAI2
Q8DHY6
Q8XCX9
Q9BHM6
P72703
A8GIX7
Q3KLY0
Q3B5D1
P72587
O23141
A3DP93
B7N7I9
A5GWM2
B5YQD6
Q32C02
Q38ZL1
Q083L6
A9ZPJ6
Q9R0W2
A2SPT0
A6WR31
Q8TLM4
Q04L01
B3QWJ5
Q31DD8
Q0ACK8
Q7VRG4
B0KI18
C3NGS9
Q083U9
Q8FE34
B1LDE8
B3EGI2
Q8TKB4
A1TY02
C3K5U8
Q8PZP7
A2BM05
C5A5L9
Q5ZZK4
A3D798
Q8YAS3
B8ZP26
Q82JP0
Q9LYT1
Q9HK30
Q5LIQ3
A7ZR59
Q4ZLL3
C1CRX2
C3MQN7
Q3HVN1
Q97AN7
Q6KZS5
Q9UWU1
C1CDR9
B1YD10
A4SFG2
B5EIW4
A9N3R6
Q02UC5
O15244
A0A4W3
C3N6F7
A4YH98
O28025
B5XUB1
P60652
Q3YXT4
Q837U5
Q9V173
E0SPG5
Q8TWM9
Q819L4
Q03NG2
Q0T0V3
C1KV77
Q12LW6
Q87VU3
Q8ZGS9
Q2SRJ6
C3MWN7
Q8TXD4
C5A0K6
B3EAF3
P60656
B7MMC5
P60658
B8CR70
Q9PK21
B4F1A4
Q0HW78
Q8P448
B4T5I5
Q9KLD1
Q7MK24
A9M254
A1KVF9
P73270
Q7NE10
C4K6F4
A8G243
Q9PK20
C5BAV1
P70999
Q8YAS7
A9ZPJ7
B1YAA9
Q9PH02
B4TV55
A8H5G3
Q2NRD3
Q725C8
Q8PFQ5
P28629
P60061
B1IT67
Q9SI64
A2CDK1
Q93XI4
Q8ZWK3
O84378
B5F5K3
A8APF8
Q8YRP3
B0B7U3
P60063
Q6MSR6
Q9HUX1
Q8YAS5
B9M6H6
Q9RXR4
C4L9A9
A6L012
B2U0V8
A0KIP8
B7V2K4
A9A979
Q83Q93
A4Y5Y9
Q7TUJ9
Q7P0S6
Q7NU27
Q8ZHG0
Q9YG22
A5VX45
Q8U0G6
Q5X0L4
A1RV83
A0L0W9
B0R6U7
B3QM53
Q9K6B9
Q5PJH7
Q87F25
P60062
Q96A70
A6UUL7
Q725C4
B7LYW6
Q7XRA1
A4XP44
A4Y946
Q9HNQ0
Q48Q55
Q87NU5
A3MTU5
B1IB89
Q31WK0
Q7N122
B5FUJ0
O42887
Q88R68
P21170
B7UHY3
Q971K9
A8A990
B5FUJ7
Q8DA54
B4F1A3
B5BFP3
B4TV53
A1RHF0
Q97RA4
A6UQM7
A6VHH0
Q97B59
B5QXK5
Q6LWX2
O02713
P58889
Q88QC7
A6WM65
Q5SK28
Q8EFU5
A2AS89
P60653
C6A2R5
Q725C6
C6A3Q6
B7LPE7
A7MJQ1
B5XUB2
O84379
B2IP79
A4G0Z0
A8MBV3
P60651
Q96412
Q9K0U3
O81160
Q255I1
A1S712
B5YQD4
A1RXS9
Q12UX3
C3MRH3
P60065
A2BIT1
B7NI01
Q0T0V7
Q72JK8
Q43075
Q9Z6M8
Q9Z6M7
Q2SRJ4
Q666N7
O26956
P60654
Q0HJY2
C0PY54
Q9SNN0
A9N4N1
A0KVN8
Q5L5E7
Q4J932
B0TQX3
Q64ZT8
Q9JT25
Q9CEY4
Q504N2
C4KHX2
A8A477
Q8ZHG8
Q5F6R3
Q255I0
Q3KLY3
Q0D2L3
A9KY70
Q03HM9
Q7UTS2
A4SPD6
B5F5L1
B2I6M1
A2BNH3
Q837U7
Q6LG16
Q0HYZ3
Q5X986
Q18FU7
B1KRD4
Q814Q2
B6I775
Q5L5E6
Q8DW19
Q7V3M9
A3QDD8
MTBLS138
MTBLS3769
MTBLS2017
MTBLS1182
MTBLS1282
MTBLS201
MTBLS1085
MTBLS1411
MTBLS3657
MTBLS1071
MTBLS1861
MTBLS1757
1.4.3.13
1.14.13.39
3.5.3.11
3.4.21.83
2.3.1.64
4.1.1.17
1.4.3.22
3.5.3.20
2.7.3.1
3.5.3.1
2.6.1.82
2.4.2.31
2.7.3.3
1.4.3.21
3.5.3.6
3.4.22.70
3.5.3.12
2.5.1.16
3.5.3.16
2.1.3.3
2.3.1.138
4.1.1.50
3.4.24.20